An integrative Regulatory Network analysis tool
for
Arabidopsis thaliana

Discover Multi-layered Regulatory Network

Upstream regulatory network analysis pipe-line in Arabidopsis thaliana

iRegNet suggests multi-layered regulatory network using genome-wide regulome profiles in Arabidopsis.

Massive database

iRegNet database covers 2,769 ChIP-seq and 941 DAP-seq libraries for 606 histone marks, 789 transcription factors and 241 proteins.
In addition, co-expression network and PPIs are integrated.

Intuitive interface and interactive network

User can easily analyze GOI(s) or ROI(s), and iRegNet describes results as interactive regulatory network.

Schematic diagram of iRegNet analysis workflow

Database coverage

Update log
Service open: 2021/Jan/15
Initial version (2021/Jan/15): iRegNet DB (v1.0: 2020/Nov/11), ATTED-II (v10.1), BioGRID (v4.2.192)
Revised version (2021/Jun/23): iRegNet DB (v1.0: 2020/Nov/11), ATTED-II (v11.0), BioGRID (v4.2.192)

Function update
v1.0: Interactive network visualization module is updated.

How to cite

2021/Jul/17: The manuscript has been accepted for pubilcation in Plant Physiology.

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